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Each type of protein is usually sent to a particular part of the cell. An important part of cell biology is the investigation of molecular mechanisms by which proteins are moved to different places inside cells or secreted from cells. Most proteins are synthesized by ribosomes in the rough endoplasmic reticulum (RER). Ribosomes contain the nucleic acid RNA, which assembles and joins amino acids to make proteins. They can be found alone or in groups within the cytoplasm as well as on the RER. This process is known as protein biosynthesis. Biosynthesis (also called biogenesis) is an enzyme-catalyzed process in cells of living organisms by which substrates are converted to more complex products (also simply known as protein translation). Some proteins, such as those to be incorporated in membranes (known as membrane proteins), are transported into the RER during synthesis. This process can be followed by transportation and processing in the Golgi apparatus. The Golgi apparatus is a large organelle that processes proteins and prepares them for use both inside and outside the cell. The Golgi apparatus is somewhat like a post office. It receives items (proteins from the ER), packages and labels them, and then sends them on to their destinations (to different parts of the cell or to the cell membrane for transport out of the cell).[1] From the Golgi, membrane proteins can move to the plasma membrane, to other sub-cellular compartments, or they can be secreted from the cell. The endoplasmic reticulum (ER) and Golgi can be thought of as the "membrane protein synthesis compartment" and the "membrane protein processing compartment", respectively. There is a semi-constant flux of proteins through these compartments. ER and Golgi-resident proteins associate with other proteins but remain in their respective compartments. Other proteins "flow" through the ER and Golgi to the plasma membrane. Motor proteins transport membrane protein-containing vesicles along cytoskeletal tracks to distant parts of cells such as the axon terminals of neurons. Some proteins that are made in the cytoplasm contain structural features that target them for transport into mitochondria or the cell nucleus. Some mitochondrial proteins are made inside mitochondria and are coded for by mitochondrial DNA. In plants, chloroplasts also make some cell proteins. Extracellular and cell surface proteins destined to be degraded can move back into intracellular compartments upon being incorporated into endocytosed vesicles, some of which fuse with lysosomes where the proteins are broken down to their individual amino acids. The degradation of some membrane proteins begins while still at the cell surface when they are separated by secretases. Proteins that function in the cytoplasm are often degraded by proteasomes. |
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